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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCDC40, coiled-coil domain containing 40
Sequence ID:NM_001243342
NM_017950
RefSeqGene ID:NG_029761
Entrez Gene ID:55036
Ensembl ID:ENSG00000141519

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 78022168 - 78074403


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4838111Full LengthBC035251coiled-coil domain containing 40

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243342 NP_001230271    
NM_017950 NP_060420 Q4G0X9  

Related Sequences

 
mRNAGenPeptSwissProt
BC035251 AAH35251 Q4G0X9
BC058288 AAH58288 Q4G0X9
AK000760 BAA91365 Q4G0X9
AB046860 BAB13466 Q4G0X9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC40 NP_060420 M.musculus Ccdc40 207607 Gene Info NP_780639 64
R.norvegicus Ccdc40 287867   NP_001128160 64
D.melanogaster l(2)41Ab 5740691   NP_001104357 26
A.gambiae AgaP_AGAP009129 1280085   XP_319887 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)