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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1orf85, chromosome 1 open reading frame 85
Sequence ID:NM_001256604
NM_001256605
NM_001256608
NM_001256609
NM_144580
Entrez Gene ID:112770
Ensembl ID:ENSG00000198715

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 156262484 - 156265449

Transcript StartTranscript EndChromosomal Start Chromosomal End
20535156262484156262999
536792156263110156263366
7931011156263808156264026
10121212156264155156264355
12131470156264549156264806
14711603156265316156265448

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4850051Full LengthBC018757chromosome 1 open reading frame 85
4639306IncompleteBC011575chromosome 1 open reading frame 85
5187328IncompleteBC036340chromosome 1 open reading frame 85

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256604 NP_001243533    
NM_001256605 NP_001243534    
NM_001256608 NP_001243537    
NM_001256609 NP_001243538    
NM_144580 NP_653181 Q8WWB7  

Related Sequences

 
mRNAGenPeptSwissProt
BC011575 AAH11575 Q8WWB7
BC018757 AAH18757 Q8WWB7
BC036340 AAH36340 Q8WWB7
AY358450 AAQ88815 Q8WWB7
AK075349 BAC11561 Q8WWB7
AK296157 BAG58896 Q8WWB7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1orf85 NP_653181 M.musculus 0610031J06Rik 56700 Gene Info NP_064387 80
R.norvegicus RGD1303130 295231   NP_001004226 80
A.gambiae AgaP_AGAP004431 1274574   XP_313717 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)