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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTCHD2, patched domain containing 2
Sequence ID:NM_020780
Entrez Gene ID:57540
Ensembl ID:ENSG00000204624

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 11539294 - 11597607

 Exon Info From UCSC:
NM_020780

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069275Full LengthBC172581patched domain containing 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020780 NP_065831 Q9P2K9  

Related Sequences

 
mRNAGenPeptSwissProt
BC172581 AAI72581  
AB037758 BAA92575 Q9P2K9
AB593117 BAJ84057 F1T0I3
AL117235 CAB55302 Q9UJD7
AL117236 CAB55303 Q9P2K9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTCHD2 NP_065831 M.musculus Ptchd2 242748 Gene Info NP_001076811 92
R.norvegicus Ptchd2 313705   NP_001101462 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)