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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TSPO, Translocator protein (18kDa)
Sequence ID:NM_001256530
NM_001256531
NM_000714
Entrez Gene ID:706
Ensembl ID:ENSG00000100300

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 43555321 - 43559216

Transcript StartTranscript EndChromosomal Start Chromosomal End
1764354753443547609
772874355521543555425
2884264355705743557195
4278654355880843559246

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2989070Full LengthBC001110translocator protein (18kDa)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000705  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000714 NP_000705 P30536 TspO_MBR
NM_001256530 NP_001243459    
NM_001256531 NP_001243460    

Related Sequences

 
mRNAGenPeptSwissProt
M36035 AAA03652 P30536
L21950 AAA18227 B1AH88
AF075589 AAC31172 O76068
AF075590 AAC31173 O76068
BC001110 AAH01110 P30536
BT006949 AAP35595 P30536
AY998017 AAY45787 P30536
DQ890713 ABM81639  
CR456409 CAG30295 P30536
CR457007 CAG33288 B1AH88

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSPO NP_000705 M.musculus Tspo 12257 Gene Info NP_033905 81
R.norvegicus Tspo 24230   NP_036647 80
A.gambiae AgaP_AGAP000426 1271819   XP_310673 50
D.melanogaster CG2789 33231   NP_608531 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)