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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MBNL1, Muscleblind-like splicing regulator 1
Sequence ID:NM_021038
NM_207292
NM_207293
NM_207297
NM_207296
NM_207295
NM_207294
Entrez Gene ID:4154
Ensembl ID:ENSG00000152601

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 151986256 - 152183568

 Exon Info From UCSC:
NM_021038
NM_207292
NM_207293
NM_207297
NM_207296
NM_207295
NM_207294

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6042311Full LengthBC050535muscleblind-like (Drosophila)
6044671Full LengthBC043493muscleblind-like (Drosophila)
3935812IncompleteBC005296muscleblind-like (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997178  NP_997177  NP_997175  NP_997180  NP_066368  NP_997176  NP_997179  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021038 NP_066368   zf-CCCH
NM_207292 NP_997175   zf-CCCH
NM_207293 NP_997176 Q9NR56 zf-CCCH
NM_207294 NP_997177   zf-CCCH
NM_207295 NP_997178   zf-CCCH
NM_207296 NP_997179   zf-CCCH
NM_207297 NP_997180   zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
AF255334 AAF76138 Q9NR56
BC043493 AAH43493 Q9NR56
BC050535 AAH50535 Q86VM6
AF395876 AAK82889 Q9NR56
AF401998 AAK94915 Q9NR56
AF497718 AAP30726 Q86UV9
AF497719 AAP30727 Q9NR56
EU446985 ABZ92514  
AB007888 BAA24858 Q9NR56
AK297133 BAG59637 B4DLS5
AK304089 BAG64995 B4E233
Y13829 CAA74155 Q9NR56
AJ308400 CAC83727 Q9NR56
CR749454 CAH18290 Q68DD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MBNL1 NP_997176 M.musculus Mbnl1 56758 Gene Info NP_064391 100
R.norvegicus Mbnl1 282635   XP_002729084 100
D.melanogaster mbl 36945   NP_001137689 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)