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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LAMA2, laminin, alpha 2
Sequence ID:NM_000426
NM_001079823
RefSeqGene ID:NG_008678
Entrez Gene ID:3908
Ensembl ID:ENSG00000196569

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MUSCULAR DYSTROPHY, CONGENITAL MEROSIN-DEFICIENT 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129636964 - 129837708

 Exon Info From UCSC:
NM_000426
NM_001079823

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069258Full LengthBC172564laminin, alpha 2
100068951BC172257laminin, alpha 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000417  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000426 NP_000417   EGF
Laminin_B
Laminin_EGF
Laminin_G_1
Laminin_N
Laminin_G_2
Laminin_I
Laminin_II
EGF_2
NM_001079823 NP_001073291    

Related Sequences

 
mRNAGenPeptSwissProt
M59832 AAA63215 P24043
BC172257 AAI72257  
BC172564 AAI72564  
AB208922 BAD92159 Q59H37
Z26653 CAA81394 P24043

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LAMA2 NP_000417 M.musculus Lama2 16773 Gene Info NP_032507 88
R.norvegicus Lama2 309368   XP_219866 88
C.elegans lam-3 172952   NP_492775 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta