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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACAA2, acetyl-CoA acyltransferase 2
Sequence ID:NM_006111
Entrez Gene ID:10449
Ensembl ID:ENSG00000167315

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 47309874 - 47340251

NM_006111 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
204464730987447310300
4476014731156647311720
6026724731366047313730
6738024731783947317968
8039784731852147318696
97911264732064947320796
112712434732213447322250
124413724732383547323963
137315394732905647329222
154019524733983847340250

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820744Full LengthBC001918acetyl-Coenzyme A acyltransferase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006102  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006111 NP_006102 P42765 EC 2.3.1.16 Thiolase_N
Thiolase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001918 AAH01918 P42765 EC 2.3.1.16
DQ893376 ABM84302    
DQ896697 ABM87696    
D16294 BAA03800 P42765 EC 2.3.1.16
AK314462 BAG37070 B2RB23  
AK054673 BAG51410 B3KNP8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACAA2 NP_006102 M.musculus Acaa2 52538 Gene Info NP_803421 88
R.norvegicus Acaa2 170465   NP_569117 87
A.gambiae AgaP_AGAP006821 1270244   XP_308924 60
D.melanogaster yip2 34313   NP_523528 60
C.elegans Thiolases 176756   NP_499752 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)