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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ERI1, exoribonuclease 1
Sequence ID:NM_153332
Entrez Gene ID:90459
Ensembl ID:ENSG00000104626

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 8888246 - 8889996

NM_153332 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
136888603138860680
36954788654798865657
54875888690518869261
75984288738318873914
84395288758068875915
953106788778598877973
1068461588873018890848

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5186320Full LengthBC035279exoribonuclease 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_699163  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153332 NP_699163 Q8IV48 Exonuc_X-T
SAP

Related Sequences

 
mRNAGenPeptSwissProt
BC035279 AAH35279 Q8IV48
AY310909 AAQ21219 Q8IV48
DQ890841 ABM81767  
DQ893996 ABM84922  
AK291062 BAF83751 Q8IV48
AK301506 BAG63016 B4DWF4
AL137679 CAB70871 Q8IV48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ERI1 NP_699163 R.norvegicus Eri1 361159   NP_001014165 85
M.musculus Eri1 67276 Gene Info NP_080343 84
S.pombe eri1 2540347   NP_595533 40
C.elegans eri-1 176868   NP_741292 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)