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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRRC55, Leucine rich repeat containing 55
Sequence ID:NM_001005210
Entrez Gene ID:219527
Ensembl ID:ENSG00000183908

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 56957345 - 56959188

NM_001005210 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19375694922056950156
93854075695471856959187

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020727Full LengthBC136737leucine rich repeat containing 55
9020729Full LengthBC136739leucine rich repeat containing 55
40127731IncompleteBC150572leucine rich repeat containing 55

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005210  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005210 NP_001005210 Q6ZSA7 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC136737 AAI36738 Q6ZSA7
BC136739 AAI36740 Q6ZSA7
BC150572 AAI50573 Q6ZSA7
AK127591 BAC87047 Q6ZSA7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRRC55 NP_001005210 M.musculus Lrrc55 241528 Gene Info NP_001028518 95
R.norvegicus Lrrc55 311171   NP_001116447 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)