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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RANBP2, RAN binding protein 2
Sequence ID:NM_006267
RefSeqGene ID:NG_012210
Entrez Gene ID:5903
Ensembl ID:ENSG00000153201

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 109347783 - 109400742

 Exon Info From UCSC:
NM_006267

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006267 NP_006258 P49792 EC 5.2.1.8  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U19240 AAA85837 Q13073  
U19248 AAA85838 P49792 EC 5.2.1.8
AY170822 AAO13594 Q5JC46  
D42063 BAA07662 P49792 EC 5.2.1.8
AB209483 BAD92720 P49792 EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RANBP2 NP_006258 R.norvegicus Ranbp2 294429   XP_215401 82
M.musculus Ranbp2 19386 Gene Info NP_035370 81
D.melanogaster Nup358 43041   NP_651361 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta