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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX6, T-box 6
Sequence ID:NM_004608
NM_080758
RefSeqGene ID:NG_023283
Entrez Gene ID:6911
Ensembl ID:ENSG00000149922

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 30097081 - 30102538

Transcript StartTranscript EndChromosomal Start Chromosomal End
316733009711630097758
6748573009783230098015
8589313009809830098171
93210023009986530099935
100311493010001330100159
115014173010026330100530
141816523010207830102312
165318183010239630102561
181918303010319330103204

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5460190Full LengthBC026031T-box 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004599  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004608 NP_004599 O95947 T-box

Related Sequences

 
mRNAGenPeptSwissProt
BC026031 AAH26031 O95947
EU446659 ABZ92188  
AK022330 BAB14014 Q9HA44
AJ007989 CAA07812 O95947

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX6 NP_004599 M.musculus Tbx6 21389 Gene Info NP_035668 88
R.norvegicus Tbx6 365371   NP_001102390 87
A.gambiae AgaP_AGAP005895 1276561   XP_315924 47
D.melanogaster Doc3 39036   NP_648280 47
D.melanogaster Doc1 39039   NP_648283 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)