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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GJB5, gap junction protein, beta 5, 31.1kDa
Sequence ID:NM_005268
RefSeqGene ID:NG_016243
Entrez Gene ID:2709
Ensembl ID:ENSG00000189280

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 35220685 - 35224007

NM_005268 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1763522072035220795
7712823522290735224112

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3639452Full LengthBC004379gap junction protein, beta 5, 31.1kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005259  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005268 NP_005259 O95377 Connexin

Related Sequences

 
mRNAGenPeptSwissProt
AF052693 AAD18005 O95377
BC004379 AAH04379 O95377
HQ447375 ADQ31861  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GJB5 NP_005259 M.musculus Gjb5 14622 Gene Info NP_034421 77
R.norvegicus Gjb5 29586   NP_062114 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)