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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PBLD, phenazine biosynthesis-like protein domain containing
Sequence ID:NM_001033083
NM_022129
Entrez Gene ID:64081
Ensembl ID:ENSG00000108187

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 70042416 - 70056891

 Exon Info From UCSC:
NM_001033083
NM_022129

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3879159Full LengthBC009738phenazine biosynthesis-like protein domain containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071412  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033083 NP_001028255    
NM_022129 NP_071412 P30039 PhzC-PhzF

Related Sequences

 
mRNAGenPeptSwissProt
BC009738 AAH09738 P30039
AB049758 BAB16606 P30039
AK027673 BAB55285 P30039
AK092826 BAC03986 Q8NAD7
AK312275 BAG35205 B2R5Q8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PBLD NP_071412 M.musculus Pbld1 68371 Gene Info NP_080977 84
R.norvegicus Pbld 171564   NP_612539 84
M.musculus Pbld2 67307 Gene Info NP_080361 81
R.norvegicus LOC100360692 100360692   XP_002728992 80
A.thaliana AT4G02860 828159   NP_192195 44
A.thaliana AT1G03210 838493   NP_171820 44
C.elegans T04A11.1 188042   NP_502385 43
C.elegans T04A11.4 188044   NP_502388 43
C.elegans T04A11.2 188043   NP_502386 42
C.elegans T04A11.5 178200   NP_502389 42
A.thaliana AT4G02850 828160   NP_192194 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)