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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SLC5A1, solute carrier family 5 (sodium/glucose cotransporter), member 1
Sequence ID:NM_000343
RefSeqGene ID:NG_017045
Entrez Gene ID:6523
Ensembl ID:ENSG00000100170

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Associated Diseases (from OMIM)

DiseaseOther Genes

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 32455182 - 32506250

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100000530Full LengthBC139838solute carrier family 5 (sodium/glucose cotransporter), member 1
100014825Full LengthBC146580solute carrier family 5 (sodium/glucose cotransporter), member 1
100000434IncompleteBC139839solute carrier family 5 (sodium/glucose cotransporter), member 1
100014726BC141435solute carrier family 5 (sodium/glucose cotransporter), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000334  

Protein Infomation

NM_000343 NP_000334 P13866 SSF
NM_001256314 NP_001243243    

Related Sequences

M24847 AAA60320 P13866
BC139838 AAI39839  
BC139839 AAI39840 A4QPH0
BC141435 AAI41436  
BC146580 AAI46581  
AK312948 BAG35789 P13866
AK297665 BAH12645 B7Z4Q9
AK316184 BAH14555 B7ZA69
CR456579 CAG30465 P13866
CU013176 CAK54607  
CU013464 CAK54906  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SLC5A1 NP_000334 M.musculus Slc5a1 20537 Gene Info NP_062784 88
R.norvegicus Slc5a1 25552   NP_037165 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)