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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RB1CC1, RB1-inducible coiled-coil 1
Sequence ID:NM_001083617
NM_014781
RefSeqGene ID:NG_015833
Entrez Gene ID:9821
Ensembl ID:ENSG00000023287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
BREAST CANCERAKT1
ATM
BARD1
BRCA1
BRCA2
BRIP1
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PALB2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RAD54L
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 53535017 - 53626992

 Exon Info From UCSC:
NM_001083617
NM_014781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3908134Full LengthBC017556RB1-inducible coiled-coil 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083617 NP_001077086    
NM_014781 NP_055596 Q8TDY2  

Related Sequences

 
mRNAGenPeptSwissProt
BC017556 AAH17556 Q8TDY2
AY173931 AAO17545 Q8TDY2
DQ892402 ABM83328  
D86958 BAA13194 Q8TDY2
AB059622 BAB69690 Q8TDY2
AK291699 BAF84388 A8K6N4
AK294579 BAG57770 B4DGF9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RB1CC1 NP_055596 M.musculus Rb1cc1 12421 Gene Info NP_033956 90
R.norvegicus Rb1cc1 312927   NP_001101371 90
D.melanogaster CG1347 40700   NP_996156 31
A.gambiae AgaP_AGAP008873 1279842   XP_319618 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta