Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF213, ring finger protein 213
Sequence ID:NM_001256071
NM_020954
NM_020914
RefSeqGene ID:NG_031980
Entrez Gene ID:57674
Ensembl ID:ENSG00000173821

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 78337500 - 78369039

 Exon Info From UCSC:
NM_020954
NM_020914

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069288Full LengthBC172594ring finger protein 213

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256071 NP_001243000 Q63HN8  
NM_020954 NP_066005    

Related Sequences

 
mRNAGenPeptSwissProt
BC032220 AAH32220 Q63HN8
BC036891 AAH36891 Q63HN8
BC040341 AAH40341 Q63HN8
BC172594 AAI72594  
AF397204 AAN63520 Q63HN8
AF397205 AAN63521 Q63HN8
AB046774 BAB13380 Q63HN8
AB046838 BAB13444 Q63HN8
AK023113 BAB14411 Q9H932
AK023871 BAB14708 Q63HN8
AK025676 BAB15212 Q63HN8
AK025914 BAB15280 Q63HN8
AK026038 BAB15330 Q63HN8
AK074030 BAB84856 Q63HN8
AK127914 BAC87188 Q6ZRW9
AB537889 BAK53191 Q63HN8
BX640932 CAE45967 Q63HN8
AL832920 CAH10615 Q63HN8
BX647946 CAH56189 Q63HN8
AL833201 CAH56308 Q63HN8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF213 NP_065965 M.musculus Rnf213 672511 Gene Info XP_001477896 67
R.norvegicus Rnf213 303735   XP_221191 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)