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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC38A5, solute carrier family 38, member 5
Sequence ID:NM_033518
RefSeqGene ID:NG_021469
Entrez Gene ID:92745
Ensembl ID:ENSG00000017483

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48316926 - 48328565

 Exon Info From UCSC:
NM_033518

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506044Full LengthBC019246solute carrier family 38, member 5
4649053IncompleteBC027721solute carrier family 38, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_277053  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033518 NP_277053 Q8WUX1 Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC019246 AAH19246 Q8WUX1
BC027721 AAH27721 Q8WUX1
AF276889 AAK61856 Q8WUX1
AF318358 AAL55865 Q8WUX1
DQ893060 ABM83986  
DQ896312 ABM87311  
AK094788 BAG52932 Q8WUX1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC38A5 NP_277053 R.norvegicus Slc38a5 192208   NP_620209 88
M.musculus Slc38a5 209837 Gene Info NP_766067 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)