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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCDH8, Protocadherin 8
Sequence ID:NM_002590
NM_032949
Entrez Gene ID:5100
Ensembl ID:ENSG00000136099

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 53418108 - 53422774

 Exon Info From UCSC:
NM_002590
NM_032949

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5278690Full LengthBC036025protocadherin 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116567  NP_002581  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002590 NP_002581 O95206 Cadherin
Cadherin_2
NM_032949 NP_116567   Cadherin
Cadherin_2

Related Sequences

 
mRNAGenPeptSwissProt
AF061573 AAC70009 O95206
BC036025 AAH36025 O95206
AY013873 AAK21986 O95206
DQ893339 ABM84265  
AK293747 BAG57169 B4DEQ8
AK297652 BAG60019 O95206

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCDH8 NP_002581 M.musculus Pcdh8 18530 Gene Info NP_067518 94
R.norvegicus Pcdh8 64865   NP_074059 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)