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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STOML1, Stomatin (EPB72)-like 1
Sequence ID:NM_001256677
NM_004809
NM_001256672
NM_001256673
NM_001256674
NM_001256676
NM_001256675
Entrez Gene ID:9399
Ensembl ID:ENSG00000067221

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 74275559 - 74284541

Transcript StartTranscript EndChromosomal Start Chromosomal End
13210427427556074276470
104312557427699974277211
125614517427765874277853
145216557428093974281142
165618057428144874281597
180619127428269174282797
191321167428443174284634

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5185908Full LengthBC034379stomatin (EPB72)-like 1
6059393Full LengthBC065249stomatin (EPB72)-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004800  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256672 NP_001243601    
NM_001256673 NP_001243602    
NM_001256674 NP_001243603    
NM_001256675 NP_001243604    
NM_001256676 NP_001243605    
NM_001256677 NP_001243606    
NM_004809 NP_004800 Q9UBI4 Band_7
SCP2

Related Sequences

 
mRNAGenPeptSwissProt
AF074953 AAD42031 Q9UBI4
AF156557 AAF06960 Q9UBI4
BC034379 AAH34379 Q9UBI4
BC065249 AAH65249 Q9UBI4
AF111800 AAL39002 Q9UBI4
DQ064605 AAY68393 Q4PNR4
AK222665 BAD96385 Q53HB6
AK075244 BAG52092 Q9UBI4
AK300799 BAG62457 B4DUU5
AK302051 BAG63441 Q9UBI4
Y16522 CAA76271 Q9UBI4
AL109664 CAB52015 Q9UBI4
AL109665 CAB52016 Q9UBI4
CR542089 CAG46886 Q9UBI4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STOML1 NP_004800 R.norvegicus Stoml1 300748   XP_236297 90
M.musculus Stoml1 69106 Gene Info NP_081218 89
C.elegans unc-24 177594   NP_501335 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)