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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CXCR1, chemokine (C-X-C motif) receptor 1
Sequence ID:NM_000634
RefSeqGene ID:NG_011814
Entrez Gene ID:3577
Ensembl ID:ENSG00000163464

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AIDS, RAPID PROGRESSION TOCCL11
CCL2
CCL3
CCL3L1
CD209
CX3CR1
CXCL12
HLA-C
HLA-C
HLA-C
IFNG
IL10
IL4R
IL4R
KIR3DL1

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 219028492 - 219031725

NM_000634 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192416219027569219029966
24172502219031630219031715

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5217529Full LengthBC028221interleukin 8 receptor, alpha
5755928Full LengthBC072397interleukin 8 receptor, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000634 NP_000625 P25024 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
M68932 AAA59159 P25024
U11871 AAA64379 Q6LCZ9
L19591 AAB59436 P25024
BC028221 AAH28221 P25024
BC072397 AAH72397 P25024
DQ891718 ABM82644  
DQ894895 ABM85821  
AK312668 BAG35550 P25024
AK298647 BAG60821 B4DQ59
CR541994 CAG46791 P25024
CR542029 CAG46826 P25024

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCR1 NP_000625 R.norvegicus Cxcr1 54258   NP_062183 72
M.musculus Cxcr1 227288 Gene Info NP_839972 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)