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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NFS1, NFS1 nitrogen fixation 1 homolog (S. cerevisiae)
Sequence ID:NM_001198989
NM_021100
NR_037570
NM_181679
Entrez Gene ID:9054
Ensembl ID:ENSG00000244005

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 34256886 - 34287274


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6101221Full LengthBC065560NFS1 nitrogen fixation 1 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066923  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001198989 NP_001185918      
NM_021100 NP_066923 Q9Y697 EC 2.8.1.7 Aminotran_5

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF097025 AAD09187 Q9Y697 EC 2.8.1.7
BC018471 AAH18471 Q8WV90  
BC065560 AAH65560 Q9Y697 EC 2.8.1.7
HQ448113 ADQ32594    
JF432612 ADZ15829    
AK223239 BAD96959 Q53FP3  
AK312293 BAG35220 B2R5S3  
AK001470 BAG50917 Q9Y697 EC 2.8.1.7
AK056242 BAG51655 Q5QP19  
AK295215 BAG58209 B4DHP7  
AK297969 BAG60279 B4DNL7  
AK301969 BAG63382 B4DXH0  
AK302023 BAG63421 B4DXK9  
AJ010952 CAA09424 Q9Y697 EC 2.8.1.7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NFS1 NP_066923 R.norvegicus Nfs1 84594   NP_445914 93
M.musculus Nfs1 18041 Gene Info NP_035041 92
A.gambiae AgaP_AGAP009094 1280047   XP_319845 80
D.melanogaster CG12264 34613   NP_609533 78
N.crassa NCU04636 3875342   XP_959179 71
C.elegans aminotransferase 172979   NP_492812 70
S.pombe nfs1 2540403   NP_596002 68
A.thaliana NFS1 836701   NP_201373 67
S.cerevisiae NFS1 850343   NP_009912 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)