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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BSN, bassoon (presynaptic cytomatrix protein)
Sequence ID:NM_003458
RefSeqGene ID:NG_015892
Entrez Gene ID:8927
Ensembl ID:ENSG00000164061

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49694053 - 49705851

 Exon Info From UCSC:
NM_003458

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003449  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003458 NP_003449 Q9UPA5 zf-piccolo

Related Sequences

 
mRNAGenPeptSwissProt
AF052224 AAC83555 Q9UPA5
AB007894 BAA23707 Q9UPA5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BSN NP_003449 M.musculus Bsn 12217 Gene Info NP_031593 90
R.norvegicus Bsn 29138   NP_062019 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)