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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR82, WD repeat domain 82
Sequence ID:NM_025222
Entrez Gene ID:80335
Ensembl ID:ENSG00000164091

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 52288894 - 52290770

NM_025222 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130985228843752291534
309932415229255152292693
324233115229321252293281
331234675229373252293887
346835845229440052294516
358536845229539552295494
368537515230096752301033
375238495230472752304824
385042925231221652312658

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4129984IncompleteBC018941WD repeat domain 82

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025222 NP_079498 Q6UXN9  

Related Sequences

 
mRNAGenPeptSwissProt
AF132207 AAG35553  
BC011760 AAH11760  
BC018941 AAH18941  
AF173977 AAQ13620  
AY358264 AAQ88631 Q6UXN9
AK074290 BAB85039 Q6UXN9
AK291380 BAF84069 Q6UXN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR82 NP_079498 M.musculus Wdr82 77305 Gene Info NP_084172 100
A.gambiae AgaP_AGAP009700 1279086   XP_318756 71
D.melanogaster CG17293 34153   NP_609217 69
C.elegans C33H5.7 177561   NP_501280 42
A.thaliana AT5G66240 836756   NP_569031 41
S.pombe SPAC824.04 2542845   NP_593443 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)