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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RLBP1, Retinaldehyde binding protein 1
Sequence ID:NM_000326
RefSeqGene ID:NG_008116
Entrez Gene ID:6017
Ensembl ID:ENSG00000140522

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINITIS PIGMENTOSA,JUVENILE, AUTOSOMAL RECESSIVEC2orf71
CNGB1
CRX
CRX
CRX
MERTK
SPATA7
USH2A
RETINITIS PUNCTATA ALBESCENSPRPH2
RDH5
RHO

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 89753515 - 89764810

NM_000326 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
25778975309889753673
5786888975392989754039
6898478975497389755131
84810268975829089758468
102712318976035089760554
123213608976179589761923
136114728976219489762305
147315958976296789763089
159617528976476589764921

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3604048Full LengthBC004199retinaldehyde binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000317  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000326 NP_000317 P12271 CRAL_TRIO
CRAL_TRIO_N

Related Sequences

 
mRNAGenPeptSwissProt
J04213 AAA60251 P12271
BC004199 AAH04199 P12271
AK312457 BAG35364 P12271

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RLBP1 NP_000317 M.musculus Rlbp1 19771 Gene Info NP_001166954 91
R.norvegicus Rlbp1 293049   NP_001099744 91
A.gambiae AgaP_AGAP009385 1271293   XP_559860 33
D.melanogaster CG5958 34022   NP_609119 32
A.gambiae AgaP_AGAP009381 1271290   XP_310052 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)