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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BIN1, bridging integrator 1
Sequence ID:NM_004305
NM_139343
NM_139344
NM_139345
NM_139346
NM_139347
NM_139348
NM_139349
NM_139350
NM_139351
RefSeqGene ID:NG_012042
Entrez Gene ID:274
Ensembl ID:ENSG00000136717

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 127805606 - 127864690

 Exon Info From UCSC:
NM_004305
NM_139343
NM_139344
NM_139345
NM_139346
NM_139347
NM_139348
NM_139349
NM_139350
NM_139351

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3688734Full LengthBC004101bridging integrator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_647595  NP_647597  NP_647596  NP_647601  NP_647594  NP_647600  NP_647598  NP_004296  NP_647593  NP_647599  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004305 NP_004296   SH3_1
BAR
SH3_2
NM_139343 NP_647593 O00499 SH3_1
BAR
NM_139344 NP_647594   SH3_1
BAR
SH3_2
NM_139345 NP_647595   SH3_1
BAR
SH3_2
NM_139346 NP_647596   SH3_1
BAR
SH3_2
NM_139347 NP_647597   SH3_1
BAR
SH3_2
NM_139348 NP_647598   SH3_1
BAR
SH3_2
NM_139349 NP_647599   SH3_1
BAR
SH3_2
NM_139350 NP_647600   SH3_1
BAR
SH3_2
NM_139351 NP_647601   SH3_1
BAR
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
AF001383 AAB61363 O00499
U87558 AAB63263 O00499
U68485 AAC17461 O00499
AF068917 AAC23750 O00499
AF068918 AAC23751 O00499
AF068914 AAC24126 O00499
AF068915 AAC24127 O00499
AF068916 AAC24128 O00499
AF070576 AAC28646 O00499
AF043898 AAC39710 O00499
AF043899 AAC39711 O00499
AF043900 AAC39712 O00499
AF043901 AAC39713 O00499
AF004015 AAC51345 O00499
BC004101 AAH04101 Q9BTH3
BT006865 AAP35511 Q9BTH3
EU831833 ACE86592  
AK295300 BAH12028 B7Z2Z2
AK301153 BAH13418 B7Z6Y2
AL713697 CAD28496 O00499
AM392950 CAL37828  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BIN1 NP_647593 R.norvegicus Bin1 117028   NP_446411 96
M.musculus Bin1 30948 Gene Info NP_033798 96
D.melanogaster Amph 36383   NP_523717 35
C.elegans amph-1 177797   NP_501711 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)