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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HSP90B1, heat shock protein 90kDa beta (Grp94), member 1
Sequence ID:NM_003299
Entrez Gene ID:7184
Ensembl ID:ENSG00000166598

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.2-q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 104333325 - 104336517

 Exon Info From UCSC:
NM_003299

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6165138Full LengthBC066656heat shock protein 90kDa beta (Grp94), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003290  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003299 NP_003290 P14625 HSP90
HATPase_c

Related Sequences

 
mRNAGenPeptSwissProt
S74942 AAD14161 Q16251
BC009195 AAH09195 Q96GW1
BC066656 AAH66656 P14625
AY040226 AAK74072 P14625
AB209534 BAD92771 Q59FC6
AK295262 BAG58251 B4DHT9
AK298996 BAG61085 B4DQX3
AK300521 BAG62233 B4DU71
X15187 CAA33261 P14625
AJ890084 CAI64497 Q5CAQ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HSP90B1 NP_003290 M.musculus Hsp90b1 22027 Gene Info NP_035761 97
R.norvegicus Hsp90b1 362862   NP_001012197 97
C.elegans T05E11.3 178014   NP_502080 66
D.melanogaster Gp93 43354   NP_651601 61
A.thaliana SHD 828520   NP_194150 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)