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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NICN1, Nicolin 1
Sequence ID:NM_032316
Entrez Gene ID:84276
Ensembl ID:ENSG00000145029

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49461816 - 49466721

NM_032316 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125424945976549462306
254326474946238149462485
264827194946279949462870
272028334946331549463428
283430104946368449463860
301132274946654049466756

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820022Full LengthBC005050nicolin 1
6015080Full LengthBC050653nicolin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032316 NP_115692 Q9BSH3  

Related Sequences

 
mRNAGenPeptSwissProt
BC005050 AAH05050 Q9BSH3
BC050653 AAH50653 Q9BSH3
AF538150 AAN52734 Q9BSH3
JF432736 ADZ15953  
AK313073 BAG35900 B2R7Q3
AK094248 BAG52849 B2R7Q3
AK301846 BAG63289 B4DX77
AJ299740 CAC82516 Q9BSH3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NICN1 NP_115692 M.musculus Nicn1 66257 Gene Info NP_079725 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)