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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BABAM1, BRISC and BRCA1 A complex member 1
Sequence ID:NM_001033549
NM_014173
Entrez Gene ID:29086
Ensembl ID:ENSG00000105393

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 17378241 - 17390146

 Exon Info From UCSC:
NM_001033549
NM_014173

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504488Full LengthBC000788chromosome 19 open reading frame 62
3947341Full LengthBC006244chromosome 19 open reading frame 62
30364624Full LengthBC091491chromosome 19 open reading frame 62

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033549 NP_001028721 Q9NWV8  
NM_014173 NP_054892 Q9NWV8  

Related Sequences

 
mRNAGenPeptSwissProt
AF161491 AAF29106 Q9NWV8
BC000788 AAH00788 Q9NWV8
BC006244 AAH06244 Q9NWV8
BC091491 AAH91491 Q9NWV8
AK000578 BAA91268 Q9NWV8
AK299493 BAG61451 Q9NWV8
AK301193 BAG62773 Q9NWV8
AL136692 CAB66627 Q9NWV8
CR533526 CAG38557 Q9NWV8
AM393637 CAL38513  
AM393724 CAL38600  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BABAM1 NP_001028721 M.musculus 5430437P03Rik 68251 Gene Info NP_080912 91
R.norvegicus Babam1 290631   NP_001006965 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)