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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLEC12A, C-type lectin domain family 12, member A
Sequence ID:NM_138337
NM_201623
NM_001207010
RefSeqGene ID:NG_029426
Entrez Gene ID:160364
Ensembl ID:ENSG00000172322

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 10124026 - 10138194

 Exon Info From UCSC:
NM_138337
NM_201623

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5219159Full LengthBC063424C-type lectin domain family 12, member A
8992005Full LengthBC126289C-type lectin domain family 12, member A
8992007Full LengthBC126291C-type lectin domain family 12, member A
5226277IncompleteBC027967C-type lectin domain family 12, member A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612210  NP_963917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001207010 NP_001193939    
NM_138337 NP_612210 Q5QGZ9 Lectin_C
NM_201623 NP_963917   Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC063424 AAH63424 Q5QGZ9
BC126289 AAI26290 Q5QGZ9
BC126291 AAI26292 Q5QGZ9
AF247788 AAL95693 Q5QGZ9
AY426759 AAR84594 Q5QGZ9
AY498550 AAS00605 Q5QGZ9
AY498551 AAS00606 Q5QGZ9
AY498552 AAS00607 Q5QGZ9
AY547296 AAT11783 Q5QGZ9
AK314001 BAG36713 Q5QGZ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLEC12A NP_001193939 M.musculus Clec12a 232413 Gene Info NP_808354 51
R.norvegicus Clec12a 680338   NP_001128188 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)