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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RABEPK, Rab9 effector protein with kelch motifs
Sequence ID:NM_001174152
NM_001174153
NM_005833
Entrez Gene ID:10244
Ensembl ID:ENSG00000136933

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q33.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 127935683 - 127996278

 Exon Info From UCSC:
NM_001174152
NM_001174153
NM_005833

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821471Full LengthBC000503Rab9 effector protein with kelch motifs
4102355Full LengthBC065725Rab9 effector protein with kelch motifs
5396980Full LengthBC047023Rab9 effector protein with kelch motifs
5724458Full LengthBC053541Rab9 effector protein with kelch motifs

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005824  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001174152 NP_001167623    
NM_001174153 NP_001167624    
NM_005833 NP_005824 Q7Z6M1 Kelch_1
Kelch_2

Related Sequences

 
mRNAGenPeptSwissProt
BC000503 AAH00503 Q7Z6M1
BC047023 AAH47023 Q7Z6M1
BC053541 AAH53541 Q7Z6M1
BC065725 AAH65725 Q7Z6M1
DQ892252 ABM83178  
DQ895453 ABM86379  
AK290768 BAF83457 Q7Z6M1
Z97074 CAB09808 Q7Z6M1
CR456837 CAG33118 Q7Z6M1
CR541851 CAG46649 Q7Z6M1
AL832249 CAH10393 Q7Z6M1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RABEPK NP_001167623 R.norvegicus Rabepk 296649   NP_001020042 80
M.musculus Rabepk 227746 Gene Info NP_663497 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)