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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TRIM65, Tripartite motif containing 65
Sequence ID:NM_173547
NM_001256124
Entrez Gene ID:201292
Ensembl ID:ENSG00000141569

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73885048 - 73888185

Transcript StartTranscript EndChromosomal Start Chromosomal End
2224087388504173887427
240924747388789373887958
247526497388809173888265
265028837388834773888580
288429797388883573888930
298034297389260473893053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4128330Full LengthBC021259tripartite motif-containing 65
3678120IncompleteBC006138tripartite motif-containing 65
4385873IncompleteBC013181tripartite motif-containing 65
4445318IncompleteBC073831tripartite motif-containing 65
4893059IncompleteBC098412tripartite motif-containing 65

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256124 NP_001243053    
NM_173547 NP_775818 Q6PJ69 zf-C3HC4
SPRY
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
BC006138 AAH06138 Q6PJ69
BC013181 AAH13181 Q96DX1
BC021259 AAH21259 Q6PJ69
BC073831 AAH73831 Q6PJ69
BC098412 AAH98412 Q6PJ69

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM65 NP_775818 M.musculus Trim65 338364 Gene Info NP_848917 66
R.norvegicus Trim65 303684   NP_001129186 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)