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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCT2, chaperonin containing TCP1, subunit 2 (beta)
Sequence ID:NM_001198842
NM_006431
Entrez Gene ID:10576
Ensembl ID:ENSG00000166226

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 69980048 - 69995105


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322566Full LengthBC113514chaperonin containing TCP1, subunit 2 (beta)
8322568Full LengthBC113516chaperonin containing TCP1, subunit 2 (beta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006422  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198842 NP_001185771    
NM_006431 NP_006422 P78371 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
AF026293 AAC96012 P78371
AF026166 AAC98906 P78371
BC113514 AAI13515 P78371
BC113516 AAI13517 P78371
BT019966 AAV38769 P78371
HQ258283 ADR83037  
AK290767 BAF83456 P78371
AB451223 BAG70037 P78371
AB451346 BAG70160 P78371
AK294307 BAH11729 P78371
AK297685 BAH12649 B7Z4R3
AK302157 BAH13640 P78371
AK316397 BAH14768 P78371
AK316408 BAH14779 P78371
CR457071 CAG33352 P78371

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCT2 NP_006422 M.musculus Cct2 12461 Gene Info NP_031662 98
R.norvegicus Cct2 299809   NP_001005905 98
A.gambiae AgaP_AGAP009694 1279082   XP_318752 73
D.melanogaster CG7033 31838   NP_572524 71
N.crassa NCU02207 3875675   XP_959526 69
A.thaliana AT5G20890 832213   NP_197589 68
S.pombe cct2 2542212   NP_593017 68
C.elegans cct-2 174421   NP_741031 67
S.cerevisiae CCT2 854664   NP_012124 66
P.falciparum PFC0285c 814386   XP_001351144 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)