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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NDUFAB1, NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
Sequence ID:NM_005003
Entrez Gene ID:4706
Ensembl ID:ENSG00000004779

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 23592334 - 23607635

NM_005003 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1412972359233723592493
2983972359359623593695
3984852359665623596743
4866082359851723598639
6098042360744323607638

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6167387Full LengthBC058920NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004994  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005003 NP_004994 O14561 PP-binding

Related Sequences

 
mRNAGenPeptSwissProt
AF087660 AAD23566 O14561
BC058920 AAH58920 O14561
EF036489 ABO65075 A4UCS2
EF036490 ABO65076 A4UCS3
AK311877 BAG34818 O14561

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDUFAB1 NP_004994 R.norvegicus Ndufab1 293453   NP_001099764 87
M.musculus Ndufab1 70316 Gene Info NP_082453 86
M.musculus Gm4459 100043472   XP_001480523 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)