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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MATN2, matrilin 2
Sequence ID:NM_002380
NM_030583
Entrez Gene ID:4147
Ensembl ID:ENSG00000132561

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 99006707 - 99048438

 Exon Info From UCSC:
NM_002380
NM_030583

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4215380Full LengthBC010444matrilin 2
3863870IncompleteBC016394matrilin 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002380 NP_002371 O00339  
NM_030583 NP_085072    

Related Sequences

 
mRNAGenPeptSwissProt
U69263 AAC51260 O00339
BC010444 AAH10444 O00339
BC016394 AAH16394 O00339
AY358895 AAQ89254 O00339
AK027775 BAB55358 Q96AA0
AK075489 BAC11648 Q8N2G3
AK289721 BAF82410 O00339
AL137638 CAB70853 O00339
AL833931 CAD38787 O00339

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MATN2 NP_002371 R.norvegicus Matn2 299996   XP_216941 89
M.musculus Matn2 17181 Gene Info NP_058042 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)