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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FNBP1, Formin binding protein 1
Sequence ID:NM_015033
Entrez Gene ID:23048
Ensembl ID:ENSG00000187239

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 132649465 - 132805427

 Exon Info From UCSC:
NM_015033

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069261Full LengthBC101755formin binding protein 1
9052022Full LengthBC143513formin binding protein 1
9052023Full LengthBC143514formin binding protein 1
9052024Full LengthBC143515formin binding protein 1
3861911IncompleteBC018159formin binding protein 1
3928577IncompleteBC009262formin binding protein 1
6527319IncompleteBC062463formin binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055848  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015033 NP_055848 Q96RU3 SH3_1
FCH

Related Sequences

 
mRNAGenPeptSwissProt
BC062463 AAH62463 Q96RU3
BC101755 AAI01756 Q96RU3
BC143513 AAI43514 B7ZL12
BC143514 AAI43515 B7ZL13
BC143515 AAI43516 B7ZL14
AF265550 AAK49824 Q96RU3
AB011126 BAA25480 Q96RU3
AK000975 BAA91451 Q96RU3
AK023681 BAB14638 Q96RU3
AK293743 BAG57166 B4DEQ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FNBP1 NP_055848 R.norvegicus Fnbp1 192348   NP_620269 94
M.musculus Fnbp1 14269 Gene Info NP_001171120 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)