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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMURF1, SMAD specific E3 ubiquitin protein ligase 1
Sequence ID:NM_001199847
NM_020429
NM_181349
Entrez Gene ID:57154
Ensembl ID:ENSG00000198742

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 98625063 - 98741723

 Exon Info From UCSC:
NM_020429
NM_181349

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862605Full LengthBC152468SMAD specific E3 ubiquitin protein ligase 1
9020794Full LengthBC136804SMAD specific E3 ubiquitin protein ligase 1
9052935Full LengthBC144414SMAD specific E3 ubiquitin protein ligase 1
4338957IncompleteBC008574SMAD specific E3 ubiquitin protein ligase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065162  NP_851994  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199847 NP_001186776    
NM_020429 NP_065162 Q9HCE7 C2
WW
HECT
NM_181349 NP_851994   C2
WW
HECT

Related Sequences

 
mRNAGenPeptSwissProt
AF199364 AAF08298 Q9HCE7
BC136804 AAI36805 Q9HCE7
BC144414 AAI44415 Q9HCE7
BC152468 AAI52469 Q9HCE7
AF464850 AAM90910 Q9HCE7
AB046845 BAB13451 Q9HCE7
AL834242 CAD38919 Q8NDD8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMURF1 NP_065162 M.musculus Smurf1 75788 Gene Info NP_001033716 99
R.norvegicus Smurf1 690516   NP_001103068 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta