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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CATSPER1, cation channel, sperm associated 1
Sequence ID:NM_053054
RefSeqGene ID:NG_016285
Entrez Gene ID:117144
Ensembl ID:ENSG00000175294

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65784360 - 65793850

 Exon Info From UCSC:
NM_053054

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822261Full LengthBC032950cation channel, sperm associated 1
5268567Full LengthBC036522cation channel, sperm associated 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053054 NP_444282 Q8NEC5  

Related Sequences

 
mRNAGenPeptSwissProt
BC032950 AAH32950 Q8NEC5
BC036522 AAH36522 Q8NEC5
AF407333 AAL14105 Q8NEC5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CATSPER1 NP_444282 M.musculus Catsper1 225865 Gene Info NP_647462 58
R.norvegicus Catsper1 689349   XP_001070492 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)