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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OGFOD3, 2-oxoglutarate and iron-dependent oxygenase domain containing 3
Sequence ID:NM_024648
NM_175902
NR_033265
Entrez Gene ID:79701
Ensembl ID:ENSG00000181396

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 80350099 - 80376462

 Exon Info From UCSC:
NM_024648
NM_175902

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3832978Full LengthBC008897chromosome 17 open reading frame 101
4541555Full LengthBC023602chromosome 17 open reading frame 101

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024648 NP_078924 Q6PK18  
NM_175902 NP_787098    

Related Sequences

 
mRNAGenPeptSwissProt
BC008897 AAH08897 Q6PK18
BC023602 AAH23602 Q6PK18
AK025875 BAB15267 Q6PK18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C17orf101 NP_078924 M.musculus 1110031I02Rik 66179 Gene Info NP_079678 86
R.norvegicus RGD1305007 303749   NP_001013998 85
A.gambiae AgaP_AGAP009177 3291916   XP_553109 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)