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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PAPPA2, pappalysin 2
Sequence ID:NM_020318
NM_021936
RefSeqGene ID:NG_023390
Entrez Gene ID:60676
Ensembl ID:ENSG00000116183

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 176671804 - 176811820

 Exon Info From UCSC:
NM_020318
NM_021936

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063352Full LengthBC157039pappalysin 2
4604942IncompleteBC104644pappalysin 2
4714116IncompleteBC062665pappalysin 2
100062392BC156074pappalysin 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020318 NP_064714 Q9BXP8  
NM_021936 NP_068755    

Related Sequences

 
mRNAGenPeptSwissProt
BC117193 AAI17194 Q9BXP8
BC117195 AAI17196 Q9BXP8
BC156074 AAI56075  
BC157039 AAI57040  
AF311940 AAK31073 Q9BXP8
AF342989 AAL17779 Q9BXP8
AF342990 AAL17780 Q9BXP8
AB209369 BAD92606 Q59FU0
AJ278348 CAC11134 Q9BXP8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PAPPA2 NP_064714 M.musculus Pappa2 23850 Gene Info NP_001078845 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)