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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCK1, phosphoenolpyruvate carboxykinase 1 (soluble)
Sequence ID:NM_002591
RefSeqGene ID:NG_008205
Entrez Gene ID:5105
Ensembl ID:ENSG00000124253

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 56136163 - 56141061

NM_002591 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11235613613656136258
1243875613642756136690
3885695613712656137307
5707735613775156137954
7749615613808356138270
96211245613862056138782
112513495613922456139448
135014815613953756139668
148215775614009556140190
157826795614040556141506

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4042259Full LengthBC023978phosphoenolpyruvate carboxykinase 1 (soluble)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002582  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002591 NP_002582 P35558 EC 4.1.1.32 PEPCK

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L05144 AAA60084 P35558 EC 4.1.1.32
BC023978 AAH23978 P35558 EC 4.1.1.32
DQ893518 ABM84444    
DQ896497 ABM87496    
AK290802 BAF83491 P35558 EC 4.1.1.32
AK300072 BAG61876 B4DT64  
AK303806 BAG64760 B4E1E8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCK1 NP_002582 M.musculus Pck1 18534 Gene Info NP_035174 91
R.norvegicus Pck1 362282   NP_942075 91
D.melanogaster CG10924 37130   NP_611341 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)