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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. ALMS1, Alstrom syndrome 1
Sequence ID:NM_015120
RefSeqGene ID:NG_011690
Entrez Gene ID:7840
Ensembl ID:ENSG00000116127

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Associated Diseases (from OMIM)

DiseaseOther Genes

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 73679851 - 73830986

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4827788IncompleteBC035025Alstrom syndrome 1
4827788IncompleteBC050330Alstrom syndrome 1

Protein Infomation

NM_015120 NP_055935 Q8TCU4  

Related Sequences

BC035025 AAH35025 Q8TCU4
BC050330 AAH50330 Q8TCU4
EF151141 ABL96615 A1YZ18
AB002326 BAA20786 Q8TCU4
AJ417593 CAD10391 Q8TCU4
AX751581 CAE11759  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ALMS1 NP_055935 M.musculus Alms1 236266 Gene Info NP_660258 60
R.norvegicus Alms1 297408   NP_001100074 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)