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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDK7, cyclin-dependent kinase 7
Sequence ID:NM_001799
Entrez Gene ID:1022
Ensembl ID:ENSG00000134058

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 68530736 - 68573129

 Exon Info From UCSC:
NM_001799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3455907Full LengthBC000834cyclin-dependent kinase 7
3997991Full LengthBC005298cyclin-dependent kinase 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001790  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001799 NP_001790 P50613 EC 2.7.11.23
EC 2.7.11.22
Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L20320 AAA36657 P50613 EC 2.7.11.23
EC 2.7.11.22
BC000834 AAH00834 P50613 EC 2.7.11.23
EC 2.7.11.22
BC005298 AAH05298 P50613 EC 2.7.11.23
EC 2.7.11.22
X76171 CAA53766 Q14495  
X77303 CAA54508 P50613 EC 2.7.11.23
EC 2.7.11.22
X77743 CAA54793 P50613 EC 2.7.11.23
EC 2.7.11.22
X79193 CAA55785 P50613 EC 2.7.11.23
EC 2.7.11.22
Y13120 CAA73587 P50613 EC 2.7.11.23
EC 2.7.11.22
AM392563 CAL37441    
AM392604 CAL37482    
AM392628 CAL37506    
AM393110 CAL37988    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDK7 NP_001790 R.norvegicus Cdk7 171150   XP_215467 96
M.musculus Cdk7 12572 Gene Info NP_034004 95
A.gambiae AgaP_AGAP002646 1273315   XP_312281 68
D.melanogaster Cdk7 31441   NP_511044 68
C.elegans cdk-7 171784   NP_490952 61
A.thaliana CAK4 842993   NP_176847 57
S.pombe mcs6 2540471   NP_596349 54
S.cerevisiae KIN28 851450   NP_010175 49
N.crassa NCU03659 3876890   XP_960739 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta