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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CRYAA, crystallin, alpha A
Sequence ID:NM_000394
RefSeqGene ID:NG_009823
Entrez Gene ID:1409
Ensembl ID:ENSG00000160202

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 44589159 - 44592432

NM_000394 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12584458914044589397
2593814459062644590748
38211144459218044592912

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262133Full LengthBC069528crystallin, alpha A
8322650Full LengthBC113598crystallin, alpha A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000385  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000394 NP_000385 P02489 HSP20
Crystallin

Related Sequences

 
mRNAGenPeptSwissProt
U05569 AAA97523 P02489
L25781 AAC37570 Q13684
U66584 AAC50900 P02489
BC069528 AAH69528 P02489
BC113598 AAI13599 P02489
HQ448434 ADQ32914  
HQ258067 ADR82821  
X14789 CAA32891 P02489
CR407691 CAG28619 P02489

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CRYAA NP_000385 M.musculus Cryaa 12954 Gene Info NP_038529 95
A.gambiae AgaP_AGAP005548 1276232   XP_315550 46
A.gambiae AgaP_AGAP005547 1276231   XP_315549 46
A.gambiae AgaP_AGAP007158 1269956   XP_308610 45
A.gambiae AgaP_AGAP007159 1269955   XP_308609 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)