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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPID, peptidylprolyl isomerase D
Sequence ID:NM_005038
Entrez Gene ID:5481
Ensembl ID:ENSG00000171497

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 159630887 - 159644551

NM_005038 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19715159630279159630975
716758159631779159631821
759845159631913159631999
846987159634270159634411
9881094159636448159636554
10951217159636713159636835
12181406159638163159638351
14071513159640331159640437
15141654159642494159642634
16551851159644355159644551

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4819748Full LengthBC030707peptidylprolyl isomerase D
3909779IncompleteBC014893peptidylprolyl isomerase D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005029  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005038 NP_005029 Q08752 EC 5.2.1.8 Pro_isomerase
TPR_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L11667 AAA35731 Q08752 EC 5.2.1.8
BC014893 AAH14893 Q05DH6  
BC030707 AAH30707 Q08752 EC 5.2.1.8
DQ891562 ABM82488    
DQ894749 ABM85675    
AK313929 BAG36649 Q08752 EC 5.2.1.8
CR542081 CAG46878 Q6FGM6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPID NP_005029 M.musculus Ppid 67738 Gene Info NP_080628 94
R.norvegicus Ppidl1 501204   XP_576630 94
R.norvegicus Ppid 361967   NP_001004279 94
N.crassa NCU03853 3872010   XP_955863 55
A.thaliana SQN 816074   NP_565381 49
S.pombe wis2 2542541   NP_594787 48
S.cerevisiae CPR6 850914   NP_013317 47
A.gambiae AgaP_AGAP003265 1269170   XP_307775 44
D.melanogaster CG8336 39121   NP_729518 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)