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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHMP4C, charged multivesicular body protein 4C
Sequence ID:NM_152284
Entrez Gene ID:92421
Ensembl ID:ENSG00000164695

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 82644855 - 82670779

NM_152284 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13648264468782645050
3655428266529882665475
5436578266760482667718
6588118267037682670529
81218438267071482671745

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3828410Full LengthBC014321chromatin modifying protein 4C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689497  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152284 NP_689497 Q96CF2 ESCRT-III

Related Sequences

 
mRNAGenPeptSwissProt
BC014321 AAH14321 Q96CF2
AY329086 AAQ91195 Q96CF2
AB120734 BAC87888 Q96CF2
AK314873 BAG37388 Q96CF2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHMP4C NP_689497 R.norvegicus Chmp4c 361916   NP_001017466 88
M.musculus Chmp4c 66371 Gene Info NP_079795 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)