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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. POU3F1, POU class 3 homeobox 1
Sequence ID:NM_002699
Entrez Gene ID:5453
Ensembl ID:ENSG00000185668

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 38510277 - 38512450

NM_002699 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
129283850952238512449

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061752BC156294POU class 3 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002690  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002699 NP_002690 Q03052 Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
L26494 AAA59965 Q03052
S81257 AAB35991 Q16423
BC156294 AAI56295  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POU3F1 NP_002690 M.musculus Pou3f1 18991 Gene Info NP_035271 99
R.norvegicus Pou3f1 192110   NP_620193 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)