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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SSPN, sarcospan
Sequence ID:NM_001135823
NM_005086
RefSeqGene ID:NG_012011
Entrez Gene ID:8082
Ensembl ID:ENSG00000123096

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 26348605 - 26384009

 Exon Info From UCSC:
NM_001135823
NM_005086

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6376868Full LengthBC062299sarcospan (Kras oncogene-associated gene)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135823 NP_001129295    
NM_005086 NP_005077 Q14714  

Related Sequences

 
mRNAGenPeptSwissProt
AF016028 AAC61660 Q14714
BC062299 AAH62299 Q14714
DQ897666 ABI78937 A1YBP2
EU433933 ACA09756 B1A9X9
AK314353 BAG36988 B2RAU1
AK092925 BAG52629 B3KS67
AK304667 BAG65442 B4E3D0
X89105 CAA61479 Q14714
AL136756 CAB66690 Q14714
AM392675 CAL37553  
AM392714 CAL37592  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSPN NP_005077 M.musculus Sspn 16651 Gene Info NP_034786 85
R.norvegicus Sspn 500364   NP_001102725 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)