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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC35B2, solute carrier family 35, member B2
Sequence ID:NM_178148
Entrez Gene ID:347734
Ensembl ID:ENSG00000157593

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p12.1-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 44221843 - 44225265

NM_178148 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2115634422183844223380
156417184422407844224232
171919124422442144224614
191320594422513644225282

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4890949Full LengthBC024288solute carrier family 35, member B2
3888869IncompleteBC016839solute carrier family 35, member B2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_835361  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178148 NP_835361 Q8TB61 UAA

Related Sequences

 
mRNAGenPeptSwissProt
BC016839 AAH16839 Q8TB61
BC024288 AAH24288 Q8TB61
AY491520 AAS79661 Q8TB61
DQ893314 ABM84240  
DQ896628 ABM87627  
DQ896632 ABM87631  
EU176354 ABW03805  
AK075456 BAC11631 Q8TB61
AB097021 BAC77374 Q8TB61
AB097039 BAC77392 Q8TB61
AB106538 BAC79117 Q8TB61
AK223028 BAD96748 Q8TB61
AK123749 BAG53951 B3KVY9
AK293251 BAG56783 B4DDM2
AK293344 BAG56860 B4DDU9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC35B2 NP_835361 M.musculus Slc35b2 73836 Gene Info NP_082938 93
R.norvegicus Slc35b2 501103   NP_001032292 92
A.gambiae AgaP_AGAP002571 1273395   XP_312365 53
D.melanogaster sll 42115   NP_524389 51
C.elegans pst-1 178980   NP_741546 43
A.thaliana AT5G59740 836095   NP_200782 39
A.thaliana UTR5 823761   NP_190204 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)