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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL35, ribosomal protein L35
Sequence ID:NM_007209
Entrez Gene ID:11224
Ensembl ID:ENSG00000136942

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 127620162 - 127624234

NM_007209 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16204127620157127620345
205286127622461127622542
287423127623697127623833
424475127624188127624239

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960987Full LengthBC000348ribosomal protein L35
4251487Full LengthBC010919ribosomal protein L35
4548321Full LengthBC094828ribosomal protein L35
4896387Full LengthBC071915ribosomal protein L35

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009140  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007209 NP_009140 P42766 Ribosomal_L29

Related Sequences

 
mRNAGenPeptSwissProt
U12465 AAA51648 P42766
BC000348 AAH00348 P42766
BC010919 AAH10919 P42766
BC071915 AAH71915 P42766
BC094828 AAH94828 P42766
DQ891363 ABM82289  
DQ894543 ABM85469  
D28448 BAA05814  
AK291072 BAF83761 P42766
CR456877 CAG33158 P42766

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL35 NP_009140 R.norvegicus Rpl35 296709   NP_997676 98
M.musculus Gm10269 100040823 Gene Info XP_001475518 96
A.gambiae AgaP_AGAP001408 1281768   XP_321725 67
C.elegans rpl-35 176097   NP_498702 67
D.melanogaster RpL35 31483   NP_572243 66
A.thaliana AT5G02610 831853   NP_001190209 65
A.thaliana AT3G09500 820107   NP_187561 64
A.thaliana AT2G39390 818524   NP_181471 64
A.thaliana AT3G55170 824683   NP_191077 63
S.cerevisiae RPL35A 851336   NP_010145 57
S.cerevisiae RPL35B 851419   NP_010090 57
S.pombe rpl35 2539308   NP_587693 56
N.crassa NCU10498 5847742   XP_001728409 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)