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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GPN1, GPN-loop GTPase 1
Sequence ID:NM_001145047
NM_001145048
NM_001145049
NM_007266
NR_026735
Entrez Gene ID:11321
Ensembl ID:ENSG00000198522

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 27851902 - 27873713

 Exon Info From UCSC:
NM_001145047
NM_001145048
NM_001145049
NM_007266

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3029376Full LengthBC007451GPN-loop GTPase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009197  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145047 NP_001138519    
NM_001145048 NP_001138520    
NM_001145049 NP_001138521    
NM_007266 NP_009197 Q53RZ9
Q9HCN4
ATP_bind_1

Related Sequences

 
mRNAGenPeptSwissProt
BC007451 AAH07451 Q53RZ9
Q9HCN4
DQ893280 ABM84206  
DQ896611 ABM87610  
AB044661 BAB17612 Q53RZ9
Q9HCN4
AK312992 BAG35829 Q53RZ9
AK298827 BAG60957 Q9HCN4
AK298866 BAG60986 B4DQM4
AK302131 BAG63506 Q9HCN4
AK316404 BAH14775 Q9HCN4
AJ010842 CAA09376 Q9HCN4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPN1 NP_009197 M.musculus Gpn1 74254 Gene Info NP_598517 91
R.norvegicus LOC688393 688393   NP_001121044 91
C.elegans gop-2 175722   NP_498118 56
N.crassa NCU04507 3873089   XP_956918 55
S.pombe SPBC119.15 2540123   NP_595297 54
A.thaliana QQT2 828268   NP_193911 54
S.cerevisiae NPA3 853535   NP_012606 52
D.melanogaster CG3704 31043   NP_569872 51
A.gambiae AgaP_AGAP010314 1280293   XP_320117 50
P.falciparum PFL0075w 811068   XP_001350424 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)